The detailed information of tRNA gene sequence


Sequence ID>C131009100
Genome IDCP003882
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorreliella afzelii HLJ01 [CP003882]
Start position on genome 549511
End posion on genome 549437
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gctcactttT
tRNA gene sequence 
GTCCTCTTCGTCTATCGGTCAGGACTCCAGGTTTTCATCCTGGCAAGAGGGGTTCGATTC
CCCTAGAGGATGTCt
Downstream region at tRNA end position 
tgtcaaggaa
Secondary structure (Cloverleaf model)
>C131009100	Glu	TTC
                   T      GTCt tgtcaaggaa
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          T     CAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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