The detailed information of tRNA gene sequence


Sequence ID>C131011415
Genome IDCP004011
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum SS14 [CP004011]
Start position on genome 843361
End posion on genome 843287
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gtggcgccgT
tRNA gene sequence 
GGGCTATTAGCTCAGCTGGTAGAGCAACGCCCTTTTAAGGCGTGGGTCGATGGTTCGAAT
CCATCATGGCTCAGag
Downstream region at tRNA end position 
gtgggattgg
Secondary structure (Cloverleaf model)
>C131011415	Lys	TTT
                   T      AGag gtgggattgg
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     C T A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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