The detailed information of tRNA gene sequence


Sequence ID>C131011827
Genome IDCP004029
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis N343 [CP004029]
Start position on genome 870351
End posion on genome 870275
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aataaaatag
tRNA gene sequence 
CGGAGTGTGGCGCAGTTTGGTAGCGCACCTGGTTTGGGACCAGGGGGCCGCTGGTTCGAA
TCCAGTCGCTCCGACCA
Downstream region at tRNA end position 
gaaaattata
Secondary structure (Cloverleaf model)
>C131011827	Pro	TGG
                   g      ACCA gaaaattata
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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