The detailed information of tRNA gene sequence


Sequence ID>W1610506940
Genome IDFLSL01000012
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Ichthyocystis hellenicum 2013Arg42i [FLSL]
Start position on genome 28954
End posion on genome 29045
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccccccggac
tRNA gene sequence 
GGAGACGTGTCCGAGCGGCCGAAGGGGCTACACTGGAAATGTAGTAAACGGCTTAAACCG
TTTCGTGGGTTCGAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
aaaaatgaga
Secondary structure (Cloverleaf model)
>W1610506940	Ser	GGA
                   c      GCCA aaaaatgaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | +                 T T
    C       A G G G
      C G A        G     TAAACGGCTTAAACCGTTTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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