The detailed information of tRNA gene sequence


Sequence ID>W1610550436
Genome IDJXMS01000006
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio spirochaetisodalis [JXMS]
Start position on genome 80587
End posion on genome 80663
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caagctatga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
atatttaacc
Secondary structure (Cloverleaf model)
>W1610550436	Met	CAT
                   a      ACCA atatttaacc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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