The detailed information of tRNA gene sequence


Sequence ID>W1610575786
Genome IDLAGR01000155
Search identical group
Phylum/ClassGammaproteobacteria
Speciesbacteria symbiont BFo2 of Frankliniella occidentalis [LAGR]
Start position on genome 1942
End posion on genome 2017
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cacacagcgg
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTAGAGCATCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAAT
CCGTCATCACCCACCA
Downstream region at tRNA end position 
cttcgggtcg
Secondary structure (Cloverleaf model)
>W1610575786	Val	TAC
                   g      ACCA cttcgggtcg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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