The detailed information of tRNA gene sequence


Sequence ID>W1610584541
Genome IDLCTF01000037
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. MU80 [LCTF]
Start position on genome 6105
End posion on genome 6028
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgttaactgg
tRNA gene sequence 
GCCCCGGTAGCTCAGCCCGGTTAGAGCGGCGGGCTGCAGACCCGTAGGTCCCGGGTTCAA
ATCCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
aaaaatgaac
Secondary structure (Cloverleaf model)
>W1610584541	Cys	GCA
                   g      TCCA aaaaatgaac
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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