The detailed information of tRNA gene sequence


Sequence ID>W1610586483
Genome IDLDIW01000009
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium UASB293 [LDIW]
Start position on genome 1600
End posion on genome 1509
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
tatatgtttc
tRNA gene sequence
GGAGAGGTGGCAGAGCGGTCTAATGCGGCGGTCTTGAAAACCGTTATCTCGAGAGATCGG
GATCAAGGGTTCGAATCCCTTCCTCTCCTCCA
Downstream region at tRNA end position
gtttattttc
Secondary structure (Cloverleaf model)
>W1610586483	Ser	TGA
                   c      TCCA gtttattttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       A A G G G     C
    G         | | |                 T T
    T       A T G C
      C T A        G     TATCTCGAGAGATCGGGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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