The detailed information of tRNA gene sequence


Sequence ID>W1610612384
Genome IDLGER01000040
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfonauticus sp. 38_4375 [LGER]
Start position on genome 11478
End posion on genome 11571
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttgacggt
tRNA gene sequence 
GGAAGCGTATCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGCCGAAAGGT
CGTCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
ttttctttta
Secondary structure (Cloverleaf model)
>W1610612384	SeC(p)	TCA
                   t      GCCA ttttctttta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGCCGAAAGGTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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