The detailed information of tRNA gene sequence


Sequence ID>W1610613800
Genome IDLGGJ01000005
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocalculus sp. 52_23 [LGGJ]
Start position on genome 3307
End posion on genome 3389
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgtatatgg
tRNA gene sequence 
GCCGGGGTAGTCTAGTCCGGAAAGGCGGTGGCCTTGAAAGCCACTGGTGTTGCACCTCGG
GAGTTCAAATCTCTCCCCCGGCGttt
Downstream region at tRNA end position 
ttatgactct
Secondary structure (Cloverleaf model)
>W1610613800	Ser	TGA
                   g      Gttt ttatgactct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGTGTTGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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