The detailed information of tRNA gene sequence


Sequence ID>W1610623731
Genome IDLHXJ01000075
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259A05 MSBL1 archaeon SCGC-AAA259A05 [LHXJ]
Start position on genome 2284
End posion on genome 2211
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agaagttagc
tRNA gene sequence 
GCCGGGGTGACCGAGTGGCCAGGTGACGGACTGCAGATCCGTTAACGCCGGTTCGAATCC
GGCTCCCGGCTTCA
Downstream region at tRNA end position 
cccgattaaa
Secondary structure (Cloverleaf model)
>W1610623731	Cys	GCA
                   c      TTCA cccgattaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G G C C     A
        G A        G      | | | | |     G
      T     G C C A       G C C G G     C
      G       | | |                 T T
      G     A G G T
        C C        G     TAAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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