The detailed information of tRNA gene sequence


Sequence ID>W1610623733
Genome IDLHXJ01000139
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259A05 MSBL1 archaeon SCGC-AAA259A05 [LHXJ]
Start position on genome 1333
End posion on genome 1256
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
aaagacgaga
tRNA gene sequence 
GGGGCCGTAGGGTAGTCAGGTCTAGCCTCCTACCATGGGGCGGTAGATACCCGAGTTCAA
ATCTCGGCGGCCCCATCA
Downstream region at tRNA end position 
caccccatgt
Secondary structure (Cloverleaf model)
>W1610623733	Pseudo	GGG
                   a      ATCA caccccatgt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    C T G A        A      | | | | |     A
  A         T G G G       C C G A G     C
  G         + | | +                 T T
  G         G C C T
    T C T A        C     ATAC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  A       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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