The detailed information of tRNA gene sequence


Sequence ID>W1610623767
Genome IDLHXO01000013
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259E19 MSBL1 archaeon SCGC-AAA259E19 [LHXO]
Start position on genome 193
End posion on genome 118
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attatcgcga
tRNA gene sequence 
GCCCTGGTAGTGTAGTGGACGATCATGTGGCCCTGTCGAGGCCATGACCCGGGTTCAAAT
CCCGGCCGGGGCGCCT
Downstream region at tRNA end position 
ttccaccttt
Secondary structure (Cloverleaf model)
>W1610623767	Asp	GTC
                   a      GCCT ttccaccttt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T G T G       C C G G G     C
    G         | | +                 T T
    A       T C A T
      C G A        G     TGAC
                    T - A
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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