The detailed information of tRNA gene sequence


Sequence ID>W1610623772
Genome IDLHXO01000030
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259E19 MSBL1 archaeon SCGC-AAA259E19 [LHXO]
Start position on genome 10521
End posion on genome 10444
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
catccgttga
tRNA gene sequence 
GCCGGGGTGGCCGAGTCTGGCTTTAGGCGGCGGACTGCAGATCCGCTTACGCTGGTTCAA
ATCCGGCCCCCGGCTCCA
Downstream region at tRNA end position 
ttcatatagg
Secondary structure (Cloverleaf model)
>W1610623772	Cys	GCA
                   a      TCCA ttcatatagg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
    C T G A        G      | | + | |     A
  T         G C C G       G C T G G     C
  G           | | |                 T T
  G         A G G C
    C T T T        G     TTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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