The detailed information of tRNA gene sequence


Sequence ID>W1610623796
Genome IDLHXR01000064
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259I09 MSBL1 archaeon SCGC-AAA259I09 [LHXR]
Start position on genome 5167
End posion on genome 5245
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
agaaaaccgT
tRNA gene sequence 
GGGGCCGTGGGGTAGTCAGGTCTAGCCTCTTACCATGGGGCGGTAGACACCCGAGTTCAA
ATCTCGGCGGCCCCATCA
Downstream region at tRNA end position 
tacaaaaggt
Secondary structure (Cloverleaf model)
>W1610623796	Pseudo	GGG
                   T      ATCA tacaaaaggt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    C T G A        G      | | | | |     A
  A         T G G G       C C G A G     C
  G         + | | +                 T T
  G         G C C T
    T C T A        C     ACAC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  A       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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