The detailed information of tRNA gene sequence


Sequence ID>W1610623799
Genome IDLHXR01000138
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259I09 MSBL1 archaeon SCGC-AAA259I09 [LHXR]
Start position on genome 119
End posion on genome 196
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcactcactt
tRNA gene sequence 
GGGCCGGTGGCGTAGTCCGGCCAGCGCGTCGACCTCTTAAGCCGGAAAGCGAGGGTTCAA
ATCCCTCCCGGCCCGCCA
Downstream region at tRNA end position 
aatgggcccg
Secondary structure (Cloverleaf model)
>W1610623799	Lys	CTT
                   t      GCCA aatgggcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     A
  C         T G C G       G A G G G     C
  G         + | | |                 T T
  G         G C G C
    C C A          G     AAAGC
                    T + G
                    C - G
                    G - C
                    A   C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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