The detailed information of tRNA gene sequence


Sequence ID>W1610623802
Genome IDLHXR01000138
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259I09 MSBL1 archaeon SCGC-AAA259I09 [LHXR]
Start position on genome 457
End posion on genome 541
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctactcctc
tRNA gene sequence 
GCCCGGGTGGCAGGACGGTATTGCGCCGGCCTGGAGAGCCGGTCTCCGAGAGGGGTTAGC
GGTTCGAGTCCGCTCCCGGGCGCCA
Downstream region at tRNA end position 
taccctcctt
Secondary structure (Cloverleaf model)
>W1610623802	Ser	GGA
                   c      GCCA taccctcctt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T C G C C     A
        A G        G      | | | | |     G
      C     G A C G       A G C G G     C
      G     + | | |                 T T
      G     T T G C
        T A        G     TCTCCGAGAGGGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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