The detailed information of tRNA gene sequence


Sequence ID>W1610623937
Genome IDLHYK01000025
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA385D11 MSBL1 archaeon SCGC-AAA385D11 [LHYK]
Start position on genome 388
End posion on genome 300
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acactactaa
tRNA gene sequence 
GCCGGGGTGGCAGAATCAGGCTAATGCGCCGGCCTCGAGAGCCGGTGGTCCTTTGGATCA
TCAGGGTTCAAATCCCTGCCCCGGCGCCT
Downstream region at tRNA end position 
catttcacgg
Secondary structure (Cloverleaf model)
>W1610623937	Ser	CGA
                   a      GCCT catttcacgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C T A A        G      | | | | |     A
  A         G A C G       C A G G G     C
  G           | | |                 T T
  G         A T G C
    C T A          G     TGGTCCTTTGGATCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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