The detailed information of tRNA gene sequence


Sequence ID>W1610623941
Genome IDLHYO01000001
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA833F18 MSBL1 archaeon SCGC-AAA833F18 [LHYO]
Start position on genome 56148
End posion on genome 56235
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gccgtgattt
tRNA gene sequence 
GCGGGGGTAACCAAGCCAGGTCAAAGGTGCCAGACTCAAGATCTGGTCCCGTAGGGGTTC
AAGGGTTCAAATCCCTTCCCCCGCACCA
Downstream region at tRNA end position 
cctgatttta
Secondary structure (Cloverleaf model)
>W1610623941	Leu	CAA
                   t      ACCA cctgatttta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      | | | | |     A
  A         A C C A       A A G G G     C
  G           | | |                 T T
  G         A G G T
    T C A A        G     TCCCGTAGGGGTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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