The detailed information of tRNA gene sequence


Sequence ID>W1610663249
Genome IDLJUO01000020
Search identical group
Phylum/ClassUnclassified
Speciescandidate division WOR_3 bacterium SM23_60 [LJUO]
Start position on genome 5167
End posion on genome 5072
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
taaaattcgc
tRNA gene sequence
GGGGGCGGCATGGTGCTGGTGTGCCTACTGGACTTCAAATCCAGATATTTCGGGAGGACC
CGGAATGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position
attattaggg
Secondary structure (Cloverleaf model)
>W1610663249	SeC(p)	TCA
                   c      GCCA attattaggg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    C     C A T C C     A
      T C G        A      | | | | |     G
    G       T G G T       G T A G G     C
    G       + | |                   T T
    T       G C C T
      G T          A     ATATTTCGGGAGGACCCGGAATG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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