The detailed information of tRNA gene sequence


Sequence ID>W1610671056
Genome IDLKCM01000015
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanoperedens sp. BLZ1 [LKCM]
Start position on genome 58017
End posion on genome 58103
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caggaagtaT
tRNA gene sequence 
GCCGAGGTAGCCCAGCGGCCTAAGGCGCCGGTTTTGAAAACCGGTTGTGCACCGCACAGC
GGGAGTTCAAATCTCCCCCTCGGCGTtt
Downstream region at tRNA end position 
gattttttat
Secondary structure (Cloverleaf model)
>W1610671056	Ser	TGA
                   T      GTtt gattttttat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    G       C C C G       G G G A G     C
    G         | | |                 T T
    C       A G G C
      C T A        G     TTGTGCACCGCACAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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