The detailed information of tRNA gene sequence


Sequence ID>W1610671066
Genome IDLKCM01000111
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanoperedens sp. BLZ1 [LKCM]
Start position on genome 5605
End posion on genome 5676
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
ttactcccct
tRNA gene sequence 
GCCAAGGTGGCGGAACGGCCACGCAATCGCCTGCAGAGCGATTCCAATCCGGTTCGACTC
CGGACCTTGGCTtct
Downstream region at tRNA end position 
ttttttcatt
Secondary structure (Cloverleaf model)
>W1610671066	Pseudo	GCA
                   t      Ttct ttttttcatt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    T     A G G C C     A
        A A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C C        A     TCCAA
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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