The detailed information of tRNA gene sequence


Sequence ID>W1610671067
Genome IDLKCM01000117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanoperedens sp. BLZ1 [LKCM]
Start position on genome 14642
End posion on genome 14568
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
atgcacctgc
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGTCCATCCTTCATGCTTGGGGTGCATGAGACCTGAGTTCAA
ATCTCAGCGACCCCAtaa
Downstream region at tRNA end position 
aatctttcac
Secondary structure (Cloverleaf model)
>W1610671067	Pseudo	GGG
                   c      Ataa aatctttcac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        T     AGAC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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