The detailed information of tRNA gene sequence


Sequence ID>W1610671071
Genome IDLKCM01000137
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanoperedens sp. BLZ1 [LKCM]
Start position on genome 60511
End posion on genome 60436
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cggtagtctc
tRNA gene sequence 
GGGCCCGTAGCTTAGCAGGTGGAGCGCTCGGCTGATAACCGAGAGGTCTTGCGTTCAAAT
CGCAACGGGCCCATCA
Downstream region at tRNA end position 
tttttagaga
Secondary structure (Cloverleaf model)
>W1610671071	Ile	GAT
                   c      ATCA tttttagaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A A C G C     A
      C G A        A      | | | | |     A
    A       T T C G       T T G C G     C
    G       + | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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