The detailed information of tRNA gene sequence


Sequence ID>W1610682168
Genome IDLKML01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferacaceae archaeon B1-Br10_E2g22 [LKML]
Start position on genome 21226
End posion on genome 21143
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcgtctgct
tRNA gene sequence 
GGTGGGATGGCAGAGTGGACTATTGCGCCTGCCTTGAAAGCAGGTGGCCTATGGCCTCCA
GGGTTCGAATCCCTGTCCCACCGCat
Downstream region at tRNA end position 
tttcagccga
Secondary structure (Cloverleaf model)
>W1610682168	Ser	TGA
                   t      GCat tttcagccga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       + | | |                 T T
    A       T T G C
      C T A        G     TGGCCTATGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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