The detailed information of tRNA gene sequence


Sequence ID>W1610682238
Genome IDLKMO01000005
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon B1-Br10_U2g19 [LKMO]
Start position on genome 28057
End posion on genome 28142
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaaatacta
tRNA gene sequence 
GCCGAGGTGACTGAGTGGCTAAAGGTGCCACCCTGGAAAGGTGGTGAGCGTTACGCTCTC
CTGGGTTCAAATCCCAGCCTCGGCGCtt
Downstream region at tRNA end position 
aaccacttat
Secondary structure (Cloverleaf model)
>W1610682238	Ser	GGA
                   a      GCtt aaccacttat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G T C A       C T G G G     C
    G         + | |                 T T
    C       A G G T
      T A A        G     TGAGCGTTACGCTCTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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