The detailed information of tRNA gene sequence


Sequence ID>W1610682364
Genome IDLKMV01000016
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon PL-Br10_U2g16 [LKMV]
Start position on genome 1964
End posion on genome 2039
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaggtaggat
tRNA gene sequence 
GCGGAGCTAGTGTAGTCCGGCCCATCATGATACCCTGTCACGGTATCGACCCGGGTTCAA
ATCCCGGGCTCCGCGCtc
Downstream region at tRNA end position 
ttacttgatt
Secondary structure (Cloverleaf model)
>W1610682364	Asp	GTC
                   t      GCtc ttacttgatt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       C C G G G     C
  G           | | +                 T T
  G         T C A T
    C C C A        G     CGAC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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