The detailed information of tRNA gene sequence


Sequence ID>W1610682366
Genome IDLKMV01000042
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon PL-Br10_U2g16 [LKMV]
Start position on genome 5563
End posion on genome 5635
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cagagcctat
tRNA gene sequence 
GCCAGGGTGACAGAGTGGTTATTGTGACTGCCTGCAGAGCGGTTTCTCCTGGGTTCGAAT
CCCAGCCCTGGCTtta
Downstream region at tRNA end position 
ttccgtttat
Secondary structure (Cloverleaf model)
>W1610682366	Cys	GCA
                   t      Ttta ttccgtttat
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       C T G G G     C
    G       + | | |                 T T
    T       T T G T
      T A          G     TTCTC
                    A - T
                    C - G
                    T + G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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