The detailed information of tRNA gene sequence


Sequence ID>W1610682402
Genome IDLKMX01000009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon PL-Br10_U2g27 [LKMX]
Start position on genome 16431
End posion on genome 16520
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcatttgT
tRNA gene sequence 
GCCGGAGTGACTGAGTGGCTAAAGGTGCCAGCCTGGAAAGCTGGTGAGCGTCACAGCTCT
CCTGGGTTCAAATCCCAGCTCCGGCGTCA
Downstream region at tRNA end position 
acctatttct
Secondary structure (Cloverleaf model)
>W1610682402	Ser	GGA
                   T      GTCA acctatttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G T C A       C T G G G     C
    G         + | |                 T T
    C       A G G T
      T A A        G     TGAGCGTCACAGCTCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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