The detailed information of tRNA gene sequence


Sequence ID>W1610682640
Genome IDLKNF01000178
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNatrialbaceae archaeon Tc-Br11_E2g28 [LKNF]
Start position on genome 4973
End posion on genome 5056
Amino Acid Pseudo
Anticodon TAA
Upstream region at tRNA start position 
ctcgaggtgc
tRNA gene sequence 
GCGAGGGTAGCCAAGCAGGCCAACGGCGGTGGGCTTAAGACCCGCTCGTGTAGACGTCCT
TGGGTTCAAATCCCAACCCTCGCAtcg
Downstream region at tRNA end position 
tcgctgcgaa
Secondary structure (Cloverleaf model)
>W1610682640	Pseudo	TAA
                   c      Atcg tcgctgcgaa
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A A C C C     A
    A C G A        A      | | | | |     A
  G         A C C G       T T G G G     C
  G           | | |                 T T
  C         C G G C
    C A A          G     TCGTGTAGACGTCC
                    G - C
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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