The detailed information of tRNA gene sequence


Sequence ID>W1610754831
Genome IDLNGD01000014
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanofastidiosum methylthiophilus group archaeon U1lsi0528_Bin089 [LNGD]
Start position on genome 3175
End posion on genome 3099
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attaattagg
tRNA gene sequence 
GGGCCCATGGTCTAGTTGGTCATGACGTCGCCTTTACACGGCGGAGGTCCTGAGTTCGAA
TCTCAGTGGGCCCACTA
Downstream region at tRNA end position 
tttttggata
Secondary structure (Cloverleaf model)
>W1610754831	Val	TAC
                   g      ACTA tttttggata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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