The detailed information of tRNA gene sequence


Sequence ID>W1610754837
Genome IDLNGD01000044
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanofastidiosum methylthiophilus group archaeon U1lsi0528_Bin089 [LNGD]
Start position on genome 78
End posion on genome 154
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgcttcttt
tRNA gene sequence 
GGGCCTGTAGCTTAGACTGGTAGAGCGCCCGGCTCATAACCGGGCGGTCAGGGGTTCAAA
TCCCCCCGGGCCCACTA
Downstream region at tRNA end position 
tcagattttt
Secondary structure (Cloverleaf model)
>W1610754837	Met	CAT
                   t      ACTA tcagattttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C C C C     A
      A G A        A        | | | |     A
    C       T T C G       A G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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