The detailed information of tRNA gene sequence


Sequence ID>W1610781291
Genome IDLOBY01000057
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum sp. OCT_11 [LOBY]
Start position on genome 3873
End posion on genome 3967
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ataccccaaA
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGTGGAGCGCCTCACTGGTAAGGAGGGCTTTATCGCCGAGTG
AGGAGGTCCCGGGTTCGAATCCCGGCCGGGGCTTat
Downstream region at tRNA end position 
aggctttcct
Secondary structure (Cloverleaf model)
>W1610781291	Thr	GGT
                   A      TTat aggctttcct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     GCTTTATCGCCGAGTGAGGAGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   G
                  C       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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