The detailed information of tRNA gene sequence


Sequence ID>W1610781346
Genome IDLOCD01000157
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. JCHS_4 [LOCD]
Start position on genome 13842
End posion on genome 13920
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gagtatagct
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGATGAGAGCGGCGGCCTCCTAAGCCGTAGGTCGTGGGTTCG
AATCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
gggtttgctt
Secondary structure (Cloverleaf model)
>W1610781346	Arg	CCT
                   t      GCCA gggtttgctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T G A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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