The detailed information of tRNA gene sequence


Sequence ID>W1610784296
Genome IDLOEP01000016
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax sp. Q22 [LOEP]
Start position on genome 38602
End posion on genome 38528
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcgaccga
tRNA gene sequence 
GGGCCCTTAGCTCAGTCTGGTCAGAGCGCTCGGCTCATAACCGGGTGGTCATGGGTTCGA
ACCCCATAGGGCCCAtac
Downstream region at tRNA end position 
gttctccaca
Secondary structure (Cloverleaf model)
>W1610784296	Met	CAT
                   a      Atac gttctccaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     T A C C C     A
    C T G A        A      | | | | |     G
  T         C T C G       A T G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     TGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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