The detailed information of tRNA gene sequence


Sequence ID>W1610799826
Genome IDLOPV01000028
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax profundi SB29 [LOPV]
Start position on genome 227
End posion on genome 304
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gataaactgc
tRNA gene sequence 
GCCAAGGTGGCAGAGTCCGGCCCAACGCATCCGCCTGCAGAGCGGAACCCCCGCCGGTTC
AAATCCGGCCCTTGGCTCtt
Downstream region at tRNA end position 
ttgaccgagt
Secondary structure (Cloverleaf model)
>W1610799826	Cys	GCA
                   c      TCtt ttgaccgagt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    C T G A        G      | | | | |     A
  C         G A C G       G C C G G     C
  G             | |                 T T
  G         A C G C
    C C C A        A     ACCCCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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