The detailed information of tRNA gene sequence


Sequence ID>W1610854096
Genome IDLQHI01000009
Search identical group
Phylum/ClassUnclassified
SpeciesHadesarchaea archaeon DG-33 [LQHI]
Start position on genome 1677
End posion on genome 1765
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aacttgattg
tRNA gene sequence 
GCCGGGGTGGCAGAGCCAGGCTAATGCGGCAGCCTCGAGAGCTGTTGACCCTTTGGGTCG
TCAGGGTTCAAATCCCTGCCCCGGCGCCA
Downstream region at tRNA end position 
tcaggacttt
Secondary structure (Cloverleaf model)
>W1610854096	Ser	CGA
                   g      GCCA tcaggacttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C C G A        G      | | | | |     A
  A         G A C G       C A G G G     C
  G           | | |                 T T
  G         A T G C
    C T A          G     TGACCCTTTGGGTCGT
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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