The detailed information of tRNA gene sequence


Sequence ID>W1610918102
Genome IDLSNW01000033
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMethylothermaceae bacteria B42 [LSNW]
Start position on genome 6149
End posion on genome 6060
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctggttgcaa
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCAAACGGCGCCGACTCGAAATCGGTTGGGGCTTGACGGCCC
ACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
atgtttcatt
Secondary structure (Cloverleaf model)
>W1610918102	Ser	CGA
                   a      GCCA atgtttcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    C       A C G G
      C A A        C     TGGGGCTTGACGGCCCAC
                    G + T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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