The detailed information of tRNA gene sequence


Sequence ID>W1610919972
Genome IDLSSC01000086
Search identical group
Phylum/ClassEuryarchaeota
SpeciesTheionarchaea archaeon DG-70-1 DG-70-1 [LSSC]
Start position on genome 16744
End posion on genome 16832
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aactggtgat
tRNA gene sequence 
GCCGGGGTTGTCGAGTCCGGTAAGGCGCGGGCCTGGAGAGCCCGTGGGGCGTAAGTCCCG
CGAGGGTTCAAATCCCTCCCCCGGCGCTA
Downstream region at tRNA end position 
aataacttat
Secondary structure (Cloverleaf model)
>W1610919972	Ser	GGA
                   t      GCTA aataacttat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        T      | | | | |     A
    C       G C T G       G A G G G     C
    C         | + |                 T T
    G       A G G C
      G T A        G     TGGGGCGTAAGTCCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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