The detailed information of tRNA gene sequence


Sequence ID>W1610920104
Genome IDLSSI01000036
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 624
End posion on genome 538
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgtgtttat
tRNA gene sequence 
GCCGAGGTGGCTCAGACTGGTACGGCGCGAGCCTGGAAAGCTCGTGGGGCGTTCGCTCCG
CAGGAGTTCAAATCTCCTCCTCGGCGCtc
Downstream region at tRNA end position 
ctcattatca
Secondary structure (Cloverleaf model)
>W1610920104	Ser	GGA
                   t      GCtc ctcattatca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C T C     A
      A G A        G      | | | | |     A
    C       C T C G       A G G A G     C
    T         + | |                 T T
    G       C G G C
      G T A        G     TGGGGCGTTCGCTCCGC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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