The detailed information of tRNA gene sequence


Sequence ID>W1610920122
Genome IDLSSI01000069
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 11716
End posion on genome 11792
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gggttgtctT
tRNA gene sequence 
GGGCCTGTAGTGTAGCTTGGATATCACAGAGGCCTCCGGAGCCTCTGACTCGGGTTCAAA
TCCCGACAGGTCCGTCt
Downstream region at tRNA end position 
catttcgaca
Secondary structure (Cloverleaf model)
>W1610920122	Arg	CCG
                   T      GTCt catttcgaca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A G C C C     A
    T C G A        A      | | | | |     A
  T         T G T G       T C G G G     C
  G           | | |                 T T
  G         T C A C
    A T A          A     TGAC
                    G - C
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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