The detailed information of tRNA gene sequence


Sequence ID>W1610923796
Genome IDLSZP01000047
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesCephaloticoccus capnophilus [LSZP]
Start position on genome 63104
End posion on genome 63027
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttttggttct
tRNA gene sequence 
GTCCCCATCGTCTAGCCCGGCCTAGGACACCACCCTTTCACGGTGAGAACCGGGGTTCGA
ATCCCCGTGGGGACGCCA
Downstream region at tRNA end position 
ccaaaaagca
Secondary structure (Cloverleaf model)
>W1610923796	Glu	TTC
                   t      GCCA ccaaaaagca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     GAAC
                    C   A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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