The detailed information of tRNA gene sequence


Sequence ID>W1611016791
Genome IDLYMA01000050
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LYMA]
Start position on genome 30010
End posion on genome 29936
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tatttattat
tRNA gene sequence 
GCCGAATTAGCTCAGTGGCAGAGCAACCGCCTTGTAAGCGGTAGGTCGTCAGTTCAAATC
CGACATTCGGCACCA
Downstream region at tRNA end position 
tatcatgacg
Secondary structure (Cloverleaf model)
>W1611016791	Thr	TGT
                   t      ACCA tatcatgacg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     C A G C C     A
        G A        A      | | |   |     A
      T     C T C G       G T C A G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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