The detailed information of tRNA gene sequence


Sequence ID>WENV078105
Genome IDAAFY01021200
Search identical group
Phylum/ClassFossil microbial community from Whale Fall (Santa Cruz Basin)
Species
Start position on genome 387
End posion on genome 478
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accggggcgC
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTTGAATAGGCTAGTCTCGAAAACTAGTGAGCTCGCAAGGGTT
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
Gcccgtcttc
Secondary structure (Cloverleaf model)
>WENV078105	Ser	CGA
                   C      GCCA Gcccgtcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G A G G G     C
    G         | | |                 T T
    T       A T A G
      T G A        G     TGAGCTCGCAAGGGTTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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