The detailed information of tRNA gene sequence


Sequence ID>W1650000561
Genome IDAOLS01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula californiae ATCC 33799 [AOLS]
Start position on genome 9995
End posion on genome 10081
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcaccgtt
tRNA gene sequence 
GGCGGGATTTCCCTAGCTTGGTCAAGGGACTGCGCTGGAACCGCAGCGTCCGCGAGGACA
CGAGTGTTCAAATCACTCTCCCGCCGCtg
Downstream region at tRNA end position 
cgtgccgagg
Secondary structure (Cloverleaf model)
>W1650000561	Ser	GGA
                   t      GCtg cgtgccgagg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C A C     A
    C G A T        T      | | | | |     A
  T         C C C T       G A G T G     C
  T           | | +                 T T
  G         A G G G
    G T C A        A     CGTCCGCGAGGACAC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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