The detailed information of tRNA gene sequence


Sequence ID>W1630000575
Genome IDAOMF01000158
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus thailandensis JCM 13552 [AOMF]
Start position on genome 26351
End posion on genome 26274
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
tgcatcggaT
tRNA gene sequence 
AGCGGGATGGGATAGCCAGACATTCCGGCGGGTTCATATCCCGCAGATCGGTGGTTCAAA
TCCACCTCCCGCTATCA
Downstream region at tRNA end position 
cgcgcttctc
Secondary structure (Cloverleaf model)
>W1630000575	Pseudo	CAT
                   T      ATCA cgcgcttctc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A C C     A
      C G A        G      | | | | |     A
    C       T A G G       G G T G G     C
    A         | | |                 T T
    G       T T C C
      A C A        G     AGATC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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