The detailed information of tRNA gene sequence


Sequence ID>W1630000125
Genome IDADCE01000002
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome acidiphilum ARMAN-4 [ADCE]
Start position on genome 5590
End posion on genome 5662
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatgatataa
tRNA gene sequence 
GCCCCGATAGTCTAGTGGTCTAGGATAGTGCCCTGTCACGGCATTGACGCGGGTCCGAAT
CCCGCTCGGGGCGagc
Downstream region at tRNA end position 
ttgatttatt
Secondary structure (Cloverleaf model)
>W1630000125	Asp	GTC
                   a      Gagc ttgatttatt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | +                 T C
    T       G G A T
      C T A        A     TGAC
                    G + T
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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