The detailed information of tRNA gene sequence


Sequence ID>W1630001804
Genome IDBBBH01000008
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoculleus chikugoensis JCM 10825 [BBBH]
Start position on genome 8914
End posion on genome 8840
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gaagaggggg
tRNA gene sequence 
GGACCCATGGGGGGGTAGAGGACATCCTTTTGGGCTTCGAACCCAAGGACGCGGGTTCAA
TTCCCGCTGGGTCCGttg
Downstream region at tRNA end position 
ttttttgggg
Secondary structure (Cloverleaf model)
>W1630001804	Arg	TCG
                   g      Gttg ttttttgggg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
    A T G G        G      | | | | |     A
  G         G G G G       G C G G G     C
  A         + | | +                 T T
  G         T C C T
    G A C A        T     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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