The detailed information of tRNA gene sequence


Sequence ID>W1630010286
Genome IDLFLC01000020
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. LS_AOA [LFLC]
Start position on genome 27932
End posion on genome 28016
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagacatggt
tRNA gene sequence 
GCCGGGGTAGCCAAGTGGTAAGGCGGCTGTCTCGAAAACAGCTACGTGAAAGCGTGCAGG
GGCTCGAATCCCTTTCCCGGCGCTA
Downstream region at tRNA end position 
catcaagtgt
Secondary structure (Cloverleaf model)
>W1630010286	Ser	CGA
                   t      GCTA catcaagtgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T T C C C     A
        G A        A      | + | | |     G
      T     A C C G       A G G G G     C
      G       | | |                 C T
      G     A G G C
        T A        G     TACGTGAAAGCGTGC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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