The detailed information of tRNA gene sequence


Sequence ID>W1630010982
Genome IDLHXO01000101
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259E19 MSBL1 archaeon SCGC-AAA259E19 [LHXO]
Start position on genome 3191
End posion on genome 3266
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgtttccga
tRNA gene sequence 
AGCGGGGTGGGGCAGTCTGGAGTGTCCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAA
ATTCAGTCTCCGCTACtg
Downstream region at tRNA end position 
tttatctctc
Secondary structure (Cloverleaf model)
>W1630010982	Met	CAT
                   a      ACtg tttatctctc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T G A C T     A
    C T G A        G      + | | | +     A
  T         C G G G       G C T G G     C
  G         | + | |                 T T
  G         G T C C
    A G T          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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